Fractional Factorial vs Full Factorial DOE — When to Use Each

The 10-second answer

  • Full factorial (all combinations) is best when runs are affordable and you care about interactions without aliasing.

  • Fractional factorial (a subset of runs) is best for screening many factors quickly, accepting some aliasing (confounding) to save time and cost. support.minitab.com


Quick definitions (plain English)

  • Full factorial (2^k): tests every high/low combination for k factors (e.g., 5 factors → 2^5 = 32 runs, plus any center points you add).

  • Fractional factorial (2^(k−p)): runs a fraction (½, ¼, …) of the full set (e.g., 5 factors, half fraction → 2^(5−1) = 16 runs). You trade runs for aliasing. support.minitab.com


What “resolution” means (and why it decides everything)

Design resolution summarizes the worst-case aliasing pattern in a fractional design:

  • Resolution III: main effects can be aliased with 2-factor interactions.

  • Resolution IV: main effects are not aliased with 2-factor interactions, but 2-factor interactions may be aliased with each other.

  • Resolution V: main effects and 2-factor interactions are not aliased with any other main effects or 2-factor interactions (2-factor interactions may alias with 3-factor). NIST ITL+1

Rule of thumb:

  • Use Res IV for screening (protects main effects).

  • Use Res V when you expect key interactions and can afford a few more runs.

  • Avoid Res III unless you truly only need main-effect directionality.


Choosing between full vs fractional (practical rules)

Pick the smallest design that still estimates the effects you care about:

  1. Need clean main effects and 2-factor interactions?

    • Full factorial or Res V fractional.

  2. Just screening for the vital few factors?

    • Res IV fractional (then augment later if needed).

  3. Setup changes are costly (some factors hard to change)?

    • Consider split-plot structures regardless of full/fractional choice.

  4. Run budget fixed?


Typical run counts (2-level designs)

# factors (k) Full (2^k) Half (2^(k−1)) Quarter (2^(k−2))
3 8 4 2
4 16 8 4
5 32 16 8
6 64 32 16
7 128 64 32

Add center points if you want a curvature check (cheap and valuable). statease.com


What if you pick “too small” a fraction?

You can augment a fractional design later:

  • Foldover your design to break aliasing (e.g., upgrade Res III → Res IV, or untangle specific interactions).

  • Add targeted runs (e.g., center points; a few strategically chosen combinations) to clarify curvature or suspected interactions. NIST ITL+2NIST ITL+2


Example: 5-factor project with a tight budget

  • Full factorial: 32 runs (clean main + interactions).

  • Half-fraction Res V (common choice): 16 runs, protects main effects and 2-factor interactions from each other.

  • Start with the 16-run fraction → analyze → foldover if you need to resolve a key alias. NIST ITL+1


Solid how-to references (quick links)


Want a ready-made path?

If you’d like a guided, step-by-step workflow (screen → model → optimize) with assignments you can apply to your parts, try the Excedify DOE Training — there’s a free preview so you can test the fit first:
https://www.excedify.com/